Basic Information
Locus ID:
gene-QOZ80_6AG0536790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 49461395 | 49462543 | + | gene-QOZ80_6AG0536790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 43,581.00 Da | 38.39 | 88.25 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 52 | 2.8E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 77 | 3.66E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 55 | 1.7E-8 | - |
| SMART | SM00256 | fbox_2 | 17 | 57 | 1.1E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 118 | 300 | 2.9E-23 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 56 | 9.92138 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43260.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_002460305.2 | putative F-box/LRR-repeat/kelch-repeat protein At1g11620 [Sorghum bicolor] | 0 |
| Q8S8Q9 | F-box/LRR-repeat protein At2g43260 OS=Arabidopsis thaliana OX=3702 GN=At2g43260 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1W0W5E0 | F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G221300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology