Basic Information
Locus ID:
gene-QOZ80_6AG0532640
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 46051400 | 46052299 | - | gene-QOZ80_6AG0532640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 33,020.03 Da | 32.05 | 103.71 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 149 | 260 | 7.1E-20 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 130 | 259 | 2.67E-24 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 139 | 296 | 1.6E-32 | IPR011333 |
| SMART | SM00225 | BTB_4 | 153 | 262 | 3.0E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 153 | 222 | 17.458652 | IPR000210 |
| Coils | Coil | Coil | 284 | 299 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047051383.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TD00 | cysteine desulfurase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42663 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH03.1627, CH03.1944 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0532640, gene-QOZ80_6BG0486160 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0474200.1.CDS1 |
| Poaceae | Lolium multiflorum | 7 | gene-QYE76_004664, gene-QYE76_004665, gene-QYE76_004666 ... |
| Poaceae | Oryza coarctata | 2 | Oco17G002920, Oco17G002940 |
| Poaceae | Oryza sativa | 2 | LOC_Os09g16850.1, LOC_Os09g16870.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G194800 |
| Poaceae | Puccinellia tenuiflora | 6 | Pt_Chr0203193, Pt_Chr0500236, Pt_Chr0702590, Pt_Chr0702591 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G314700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG030150 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G186100.1.cds1, TraesCS5B02G184200.1.cds1 ... |