Basic Information
Locus ID:
gene-QOZ80_6AG0525960
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 38420814 | 38425662 | - | gene-QOZ80_6AG0525960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 107,511.18 Da | 39.51 | 71.76 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 692 | 726 | 7.6599E-5 | - |
| CDD | cd00054 | EGF_CA | 331 | 365 | 2.00126E-6 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 692 | 725 | 5.6E-5 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 396 | 458 | 5.0E-13 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 832 | 925 | 3.4E-6 | IPR001245 |
| Pfam | PF07645 | Calcium-binding EGF domain | 331 | 361 | 2.5E-5 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 47 | 107 | 5.8E-15 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 330 | 366 | 1.13E-5 | - |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 290 | 425 | 7.85E-5 | IPR009030 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 692 | 729 | 6.62E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 834 | 954 | 1.81E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 818 | 951 | 2.7E-21 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 289 | 373 | 1.2E-9 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 653 | 730 | 1.4E-11 | - |
| SMART | SM00179 | egfca_6 | 692 | 735 | 1.8E-6 | IPR001881 |
| SMART | SM00179 | egfca_6 | 331 | 373 | 3.0E-5 | IPR001881 |
| SMART | SM00181 | egf_5 | 695 | 735 | 2.4 | IPR000742 |
| SMART | SM00181 | egf_5 | 661 | 691 | 190.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 334 | 373 | 0.49 | IPR000742 |
| SMART | SM00181 | egf_5 | 289 | 330 | 96.0 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 692 | 718 | - | IPR018097 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 331 | 356 | - | IPR018097 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 954 | 973 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 948 | 984 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_039778131.1 | wall-associated receptor kinase-like 6 [Panicum virgatum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TGG9 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_44004 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0525960, gene-QOZ80_6AG0525980 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0525250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G008760 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG078570 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-31881, nbis-gene-31882, nbis-gene-50705 ... |
| Poaceae | Zoysia macrostachya | 3 | Zma_g29880, Zma_g32067, Zma_g32068 |