Basic Information
Locus ID:
gene-QOZ80_6AG0525080
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 37059083 | 37065179 | - | gene-QOZ80_6AG0525080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 99,623.85 Da | 65.69 | 60.72 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 704 | 744 | 2.44931E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 702 | 748 | 1.8E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 704 | 750 | 1.06E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 684 | 751 | 2.1E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 705 | 744 | 10.910707 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 823 | 865 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 881 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 92 | - | - |
| Coils | Coil | Coil | 634 | 654 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | NP_001145411.1 | uncharacterized LOC100278771 isoform 1 [Zea mays] | 0 |
| TrEMBL | A0A5J9THB1 | RING-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_44171 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology