HalophFGD

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Basic Information
Locus ID: gene-QOZ80_6AG0522300
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6A 23492786 23493970 - gene-QOZ80_6AG0522300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.39 43,714.55 Da 49.13 89.14 -0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 15 45 1.27E-5 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_015610891.1 uncharacterized protein LOC4346545 [Oryza sativa Japonica Group] 0
TrEMBL A0A5J9TJE5 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_44579 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 10 AH03.1369, AH03.1375, BH03.1480, BH03.1481, BH03.1484 ...
BH03.1500, CH03.1646, CH03.1647, CH03.1660, CH07.986
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_5BG0424490, gene-QOZ80_6AG0522300 ...
gene-QOZ80_6AG0522320
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.5HG0470290.1.CDS1 ...
HORVU.MOREX.r3.5HG0470330.1.CDS1, HORVU.MOREX.r3.5HG0470340.1.CDS1, HORVU.MOREX.r3.5HG0470360.1.CDS1
Poaceae Lolium multiflorum 6 gene-QYE76_004102, gene-QYE76_004104, gene-QYE76_004105 ...
gene-QYE76_004180, gene-QYE76_004198, gene-QYE76_004199
Poaceae Oryza coarctata 1 Oco17G001030
Poaceae Oryza sativa 2 LOC_Os09g08550.1, LOC_Os09g08620.1
Poaceae Puccinellia tenuiflora 9 Pt_Chr0204762, Pt_Chr0204764, Pt_Chr0204765, Pt_Chr0204769 ...
Pt_Chr0204770, Pt_Chr0705111, Pt_Chr0705112, Pt_Chr0705113, Pt_Chr0705116
Poaceae Sporobolus alterniflorus 4 Chr10G003490, Chr11G015420, Chr11G015430, Chr11G015440
Poaceae Thinopyrum elongatum 6 Tel5E01G263400, Tel5E01G289600, Tel5E01G289900 ...
Tel5E01G290300, Tel5E01G290600, Tel5E01G290700
Poaceae Triticum dicoccoides 9 gene_TRIDC5AG025450, gene_TRIDC5AG027990 ...
gene_TRIDC5AG028030, gene_TRIDC5AG028050, gene_TRIDC5AG028070, gene_TRIDC5BG029300, gene_TRIDC5BG029330, gene_TRIDC5BG029350, gene_TRIDC5BG029520
Poaceae Triticum aestivum 17 TraesCS3D02G377000.1.cds1, TraesCS5A02G152500.1.cds1 ...
TraesCS5A02G170400.1.cds1, TraesCS5A02G170700.1.cds1, TraesCS5A02G170800.1.cds1, TraesCS5A02G170900.1.cds1, TraesCS5B02G167200.1.cds1, TraesCS5B02G167500.1.cds1, TraesCS5B02G167600.1, TraesCS5B02G167700.1.cds1, TraesCS5B02G168400.1.cds1, TraesCS5D02G157700.1.cds1, TraesCS5D02G174900.1.cds1, TraesCS5D02G175200.1, TraesCS5D02G175300.1.cds1, TraesCS5D02G175500.1.cds1, TraesCS5D02G175600.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.