Basic Information
Locus ID:
gene-QOZ80_6AG0519220
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 14995897 | 14996412 | - | gene-QOZ80_6AG0519220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 19,750.78 Da | 43.01 | 77.66 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 16 | 106 | 1.4E-19 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 107 | 7.06E-20 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 103 | 3.0E-22 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 107 | 171 | 7.8E-10 | - |
| SMART | SM00225 | BTB_4 | 8 | 108 | 4.5E-14 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 8 | 73 | 12.867249 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_002442320.1 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835E0R1 | BTB domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_060054 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0519220, gene-QOZ80_6BG0471250 |