Basic Information
Locus ID:
gene-QOZ80_6AG0517360
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PPR repeat family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 11060308 | 11077606 | + | gene-QOZ80_6AG0517360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 134,310.05 Da | 35.92 | 82.95 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 865 | 877 | 0.11 | IPR011659 |
| Pfam | PF00069 | Protein kinase domain | 380 | 480 | 1.5E-11 | IPR000719 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 1080 | 1102 | 3.7E-4 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 630 | 658 | 0.24 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 951 | 991 | 0.0046 | IPR011659 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 152 | 242 | 8.7E-18 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 146 | 255 | 1.41E-27 | IPR036770 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 631 | 1102 | 5.69E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 295 | 509 | 6.55E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 361 | 499 | 7.7E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 360 | 1.9E-12 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 143 | 266 | 2.2E-27 | IPR036770 |
| Gene3D | G3DSA:2.120.10.30 | - | 615 | 801 | 1.6E-9 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 851 | 1125 | 1.5E-24 | IPR011042 |
| SMART | SM00248 | ANK_2a | 147 | 177 | 0.0031 | IPR002110 |
| SMART | SM00248 | ANK_2a | 215 | 244 | 0.0083 | IPR002110 |
| SMART | SM00248 | ANK_2a | 182 | 211 | 0.0024 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 215 | 244 | 10.391575 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 131 | 489 | 11.566572 | IPR000719 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 215 | 247 | 10.89985 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 182 | 214 | 11.38063 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 182 | 208 | 10.4977 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 330 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 557 | - | - |
| Coils | Coil | Coil | 762 | 782 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_034606741.1 | uncharacterized protein LOC117866603 isoform X1 [Setaria viridis] | 0 |
| O65924 | Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana OX=3702 GN=At2g19210 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UP86 | DPPIV_N domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_28084 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology