Basic Information
Locus ID:
gene-QOZ80_6AG0516980
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 10460353 | 10463545 | + | gene-QOZ80_6AG0516980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 68,455.65 Da | 40.15 | 93.62 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 2.8E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 185 | 6.4E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 308 | 572 | 6.9E-42 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 199 | 1.53E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 577 | 1.39E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 216 | 1.2E-56 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 384 | 596 | 4.0E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 276 | 383 | 2.5E-38 | - |
| SMART | SM00220 | serkin_6 | 307 | 576 | 2.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 307 | 597 | 35.043144 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 313 | 335 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_004965216.1 | LRR receptor kinase SERL2 [Setaria italica] | 0 |
| Q9FP13 | LRR receptor kinase SERL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TLW7 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_45258 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology