Basic Information
Locus ID:
gene-QOZ80_6AG0516650
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
NAC domain transcription factor superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 9749827 | 9752410 | + | gene-QOZ80_6AG0516650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 42,848.38 Da | 50.60 | 73.59 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 28 | 166 | 3.0E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 12 | 185 | 3.66E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 36 | 189 | 6.5E-29 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 27 | 185 | 31.317451 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 239 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_034591543.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X2 [Setaria viridis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TL82 | NAC domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_45300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology