Basic Information
Locus ID:
gene-QOZ80_6AG0515650
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 8191542 | 8212599 | - | gene-QOZ80_6AG0515650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 78,611.81 Da | 38.14 | 87.72 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 476 | 513 | 4.9E-5 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 39 | 278 | 2.2E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 26 | 281 | 2.7E-57 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 394 | 680 | 1.22E-27 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 304 | 1.5E-46 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 394 | 697 | 4.5E-41 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 101 | 5.4E-13 | - |
| SMART | SM00220 | serkin_6 | 37 | 281 | 3.4E-22 | IPR000719 |
| SMART | SM00320 | WD40_4 | 474 | 513 | 7.7E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 608 | 654 | 33.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 517 | 563 | 290.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 481 | 513 | 10.943775 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 481 | 513 | 13.181907 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 291 | 29.983173 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 66 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_034606787.1 | uncharacterized protein LOC117866628 isoform X1 [Setaria viridis] | 0 |
| Q8W4G6 | Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 | 0 | |
| TrEMBL | A0A4U6TF42 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G090000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology