halophFGD

Basic Information

Locus ID: gene-QOZ80_6AG0514860

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6A	7393939	7395311	+	gene-QOZ80_6AG0514860

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.99	42,162.26 Da	43.78	78.12	0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	6	49	2.1E-5	IPR001810
SUPERFAMILY	SSF50965	Galactose oxidase, central domain	117	294	2.35E-5	IPR011043
SUPERFAMILY	SSF81383	F-box domain	3	78	7.46E-14	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	4	45	2.7E-6	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_034580695.1	uncharacterized protein LOC117844020 [Setaria viridis]	0
TrEMBL	A0A4U6VQE9	F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G077000v2 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_6AG0514860, gene-QOZ80_6BG0466570