Basic Information
Locus ID:
gene-QOZ80_6AG0510650
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 3591455 | 3595329 | - | gene-QOZ80_6AG0510650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 76,861.50 Da | 39.49 | 100.90 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 437 | 657 | 4.45533E-131 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 120 | 414 | 3.25641E-102 | IPR044726 |
| Pfam | PF00664 | ABC transporter transmembrane region | 124 | 367 | 3.2E-34 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 456 | 604 | 5.5E-29 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 432 | 668 | 4.65E-67 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 120 | 421 | 1.57E-54 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 84 | 420 | 7.0E-62 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 422 | 675 | 1.4E-81 | IPR027417 |
| SMART | SM00382 | AAA_5 | 465 | 657 | 4.5E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 441 | 673 | 16.71349 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 122 | 402 | 39.849541 | IPR011527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 64 | - | - |
| Coils | Coil | Coil | 658 | 678 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.3 | - | 0 |
| RefSeq | XP_021319479.1 | putative ABC transporter C family member 15 [Sorghum bicolor] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9TXA5 | ABC transporter C family member 15 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39532 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology