Basic Information
Locus ID:
gene-QOZ80_6AG0509720
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 2882093 | 2882796 | + | gene-QOZ80_6AG0509720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 22,587.46 Da | 58.07 | 70.59 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 127 | 1.66091E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 164 | 202 | 5.7E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 149 | 203 | 1.88E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 21 | 130 | 1.59E-24 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 146 | 203 | 2.6E-13 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 96 | 4.4E-15 | IPR008974 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 174 | 203 | 12.019287 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 22 | 80 | 10.981366 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 158 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037489849.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B774 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH08.879 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_6AG0509720, gene-QOZ80_8AG0617850 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032442 |
| Poaceae | Oryza coarctata | 1 | Oco16G004250 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G926700, Tel2E01G926900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG075810, gene_TRIDC2AG075860 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G543300.1.cds1, TraesCS2A02G543600.1.cds1 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g22657 |