Basic Information
Locus ID:
gene-QOZ80_6AG0505730
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 146801 | 149062 | + | gene-QOZ80_6AG0505730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.94 | 82,795.16 Da | 35.92 | 72.30 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 551 | 586 | 0.001 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 413 | 425 | 0.12 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 625 | 640 | 0.14 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 496 | 526 | 3.0E-6 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 143 | 640 | 3.4E-28 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 150 | 356 | 7.5E-13 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 386 | 659 | 2.5E-28 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_008662981.1 | uncharacterized protein LOC103641407 [Zea mays] | 0 |
| TrEMBL | K7UGU4 | Putative WD40-like beta propeller repeat family protein OS=Zea mays OX=4577 GN=103641407 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology