Basic Information
Locus ID:
gene-QOZ80_6AG0505720
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 139048 | 140948 | - | gene-QOZ80_6AG0505720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 56,649.31 Da | 41.19 | 87.79 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 403 | 469 | 1.8E-15 | IPR032838 |
| Pfam | PF00092 | von Willebrand factor type A domain | 77 | 234 | 7.3E-21 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 73 | 244 | 4.59E-30 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 77 | 245 | 3.8E-39 | IPR036465 |
| SMART | SM00327 | VWA_4 | 75 | 244 | 9.1E-23 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 77 | 243 | 17.772549 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| Coils | Coil | Coil | 380 | 400 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_010235116.1 | uncharacterized protein LOC100846008 [Brachypodium distachyon] | 0 |
| Q9LTA6 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 | 0 | |
| TrEMBL | I1I6Z1 | VWFA domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100846008 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology