Basic Information
Locus ID:
gene-QOZ80_5BG0455770
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 79368093 | 79370659 | + | gene-QOZ80_5BG0455770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 37,872.84 Da | 28.16 | 91.54 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 174 | 1.46902E-58 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 202 | 355 | 1.01719E-76 | - |
| Pfam | PF00190 | Cupin | 11 | 157 | 1.4E-24 | IPR006045 |
| Pfam | PF00190 | Cupin | 199 | 341 | 1.5E-23 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 347 | 2.59E-47 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 8 | 179 | 1.9E-28 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 201 | 358 | 1.4E-49 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 198 | 342 | 1.6E-18 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 160 | 3.8E-29 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 214 | 234 | 8.9E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 261 | 277 | 8.9E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 279 | 294 | 8.9E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 319 | 336 | 8.9E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 297 | 315 | 8.9E-14 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_004960488.1 | glutelin type-D 1 [Setaria italica] | 0 |
| Q9XHP0 | 11S globulin seed storage protein 2 OS=Sesamum indicum OX=4182 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G8MV89 | Glutelin type-D-1 OS=Eleusine coracana subsp. coracana OX=191504 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology