Basic Information
Locus ID:
gene-QOZ80_5BG0454990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 78699534 | 78703877 | - | gene-QOZ80_5BG0454990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 105,024.55 Da | 43.31 | 87.78 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 538 | 923 | 3.03661E-99 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 586 | 925 | 9.3E-78 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 533 | 917 | 9.42E-87 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 541 | 804 | 1.5E-37 | - |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 671 | 769 | 1.5E-37 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 810 | 922 | 2.8E-28 | - |
| SMART | SM00119 | hect_3 | 548 | 925 | 1.0E-82 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 565 | 925 | 59.14098 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 290 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_034584351.1 | E3 ubiquitin-protein ligase UPL4-like isoform X1 [Setaria viridis] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9U3U7 | HECT-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_34190 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology