Basic Information
Locus ID:
gene-QOZ80_5BG0454720
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 78489535 | 78491829 | - | gene-QOZ80_5BG0454720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 79,288.47 Da | 50.73 | 85.31 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 400 | 680 | 7.40511E-88 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 39 | 236 | 5.47567E-56 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 22 | 240 | 3.5E-42 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 396 | 621 | 6.3E-46 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 20 | 251 | 8.4E-49 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 703 | 1.23E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 477 | 2.9E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 478 | 700 | 3.2E-58 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 242 | 1.3E-53 | - |
| SMART | SM00220 | serkin_6 | 394 | 688 | 1.1E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 689 | 37.290451 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 526 | 538 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 122 | 128 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 423 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 293 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_004960359.1 | L-type lectin-domain containing receptor kinase VIII.2 [Setaria italica] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811RZU3 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS58887 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology