HalophFGD

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Basic Information
Locus ID: gene-QOZ80_5BG0454490
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5B 78352267 78353841 - gene-QOZ80_5BG0454490
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.65 46,067.98 Da 50.00 81.30 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 23 49 1.9E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 7 67 1.83E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 2 49 9.0E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002439218.1 uncharacterized protein LOC8068169 isoform X1 [Sorghum bicolor] 0
TrEMBL A0A3L6SY38 F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G11330 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 CH05.1039
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_5AG0406450, gene-QOZ80_5AG0406460 ...
gene-QOZ80_5AG0406510, gene-QOZ80_5BG0454450, gene-QOZ80_5BG0454480, gene-QOZ80_5BG0454490
Poaceae Lolium multiflorum 2 gene-QYE76_064756, gene-QYE76_064757
Poaceae Oryza sativa 1 LOC_Os04g08460.1
Poaceae Sporobolus alterniflorus 1 Chr22G015880
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.