Basic Information
Locus ID:
gene-QOZ80_5BG0454450
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 78336397 | 78339469 | - | gene-QOZ80_5BG0454450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 55,868.78 Da | 56.90 | 82.81 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 59 | 101 | 4.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 54 | 222 | 6.8E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 55 | 102 | 2.0E-7 | - |
| SMART | SM00256 | fbox_2 | 60 | 103 | 5.3E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 54 | 106 | 8.83511 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021302764.1 | uncharacterized protein LOC8068168 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9U2W1 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_34138 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH05.1039 |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_5AG0406450, gene-QOZ80_5AG0406460 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_064756, gene-QYE76_064757 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g08460.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G015880 |