Basic Information
Locus ID:
gene-QOZ80_5BG0451600
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 76148198 | 76161367 | + | gene-QOZ80_5BG0451600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 67,550.61 Da | 41.59 | 92.82 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 371 | 503 | 7.1E-10 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 77 | 136 | 6.1E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 149 | 169 | 0.21 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 73 | 1.1E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 195 | 1.75E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 511 | 1.88E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 359 | 7.7E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 211 | 4.1E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 360 | 511 | 1.8E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 203 | 514 | 9.05072 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 126 | 139 | 7.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 147 | 160 | 7.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 620 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_023156689.1 | protein NSP-INTERACTING KINASE 3 isoform X2 [Zea mays] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U1L2 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_33352 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH05.1121 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0403180, gene-QOZ80_5BG0451600 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-23548 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g26520 |