Basic Information
Locus ID:
gene-QOZ80_5BG0449750
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 74531325 | 74533461 | + | gene-QOZ80_5BG0449750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.40 | 67,462.05 Da | 50.06 | 80.39 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 402 | 520 | 1.03508E-30 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 404 | 532 | 2.1E-20 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 394 | 537 | 1.51E-31 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 368 | 601 | 2.2E-52 | IPR016135 |
| SMART | SM00212 | ubc_7 | 403 | 554 | 1.6E-15 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 400 | 562 | 29.333527 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 330 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16920.1 | ubiquitin-conjugating enzyme 23. | 0 |
| RefSeq | XP_039802298.1 | probable ubiquitin-conjugating enzyme E2 23 [Panicum virgatum] | 0 |
| Q9ZVX1 | Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana OX=3702 GN=UBC23 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U2A3 | UBC core domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_33631 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology