Basic Information
Locus ID:
gene-QOZ80_5BG0449640
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
DNA (cytosine-5-)-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 74410227 | 74416109 | - | gene-QOZ80_5BG0449640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 55,694.03 Da | 45.80 | 82.84 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 209 | 265 | 8.53372E-30 | - |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 276 | 445 | 2.8E-20 | IPR001525 |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 211 | 263 | 1.3E-8 | IPR023780 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 103 | 458 | 1.05E-44 | IPR029063 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 197 | 263 | 7.88E-13 | IPR016197 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 55 | 435 | 1.4E-147 | - |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 436 | 481 | 1.6E-8 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 54 | 1.3E-8 | IPR043151 |
| SMART | SM00298 | chromo_7 | 209 | 268 | 1.8E-8 | IPR000953 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 210 | 263 | 11.236201 | IPR000953 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 104 | 493 | 30.066353 | IPR001525 |
| ProSitePatterns | PS00598 | Chromo domain signature. | 233 | 253 | - | IPR023779 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 280 | 292 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 369 | 382 | 1.5E-13 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 323 | 337 | 1.5E-13 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 105 | 121 | 1.5E-13 | IPR001525 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_025806236.1 | DNA (cytosine-5)-methyltransferase CMT2-like isoform X3 [Panicum hallii] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9T829 | DNA (cytosine-5-)-methyltransferase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_47190 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology