Basic Information
Locus ID:
gene-QOZ80_5BG0447710
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 72587445 | 72587960 | - | gene-QOZ80_5BG0447710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 17,818.59 Da | 26.82 | 61.05 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 23 | 171 | 3.2502E-75 | - |
| Pfam | PF00314 | Thaumatin family | 27 | 131 | 6.0E-32 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 20 | 171 | 2.35E-55 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 140 | 171 | 4.9E-5 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 21 | 139 | 2.6E-43 | IPR037176 |
| SMART | SM00205 | tha2 | 23 | 171 | 3.6E-37 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 134 | 171 | 0.025 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 141 | 2.3E-42 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 20 | 171 | 34.399429 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 161 | 170 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 76 | 105 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 64 | 75 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 42 | 51 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 22 | 34 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 111 | 127 | 2.3E-43 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_020160634.1 | thaumatin-like protein [Aegilops tauschii subsp. strangulata] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WJK0 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology