Basic Information
Locus ID:
gene-QOZ80_5BG0447680
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 72577351 | 72577866 | - | gene-QOZ80_5BG0447680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 18,230.53 Da | 32.54 | 68.48 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 26 | 171 | 4.14013E-63 | - |
| Pfam | PF00314 | Thaumatin family | 30 | 146 | 8.6E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 171 | 1.09E-46 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 171 | 1.2E-48 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 171 | 4.3E-26 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 147 | 171 | 60.0 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 150 | 1.3E-42 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 171 | 27.716774 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 6.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 79 | 108 | 6.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 6.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 115 | 131 | 6.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 67 | 78 | 6.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 161 | 170 | 6.4E-39 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_002443619.1 | thaumatin-like protein [Sorghum bicolor] | 0 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9BI90 | PR-5 OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology