Basic Information
Locus ID:
gene-QOZ80_5BG0447670
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 72573671 | 72574198 | - | gene-QOZ80_5BG0447670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 18,019.88 Da | 43.62 | 62.51 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 27 | 175 | 2.90568E-78 | - |
| Pfam | PF00314 | Thaumatin family | 31 | 135 | 5.9E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 175 | 7.59E-55 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 25 | 175 | 5.7E-51 | IPR037176 |
| SMART | SM00205 | tha2 | 27 | 175 | 8.6E-44 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 148 | 9.1E-46 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 134 | 175 | 0.0024 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 24 | 175 | 35.415596 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 26 | 38 | 1.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 46 | 55 | 1.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 80 | 109 | 1.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 165 | 174 | 1.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 68 | 79 | 1.7E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 117 | 133 | 1.7E-43 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_051222985.1 | thaumatin-like pathogenesis-related protein 3 [Lolium perenne] | 0 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WLP6 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00167 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology