Basic Information
Locus ID:
gene-QOZ80_5BG0447630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 72557977 | 72558525 | - | gene-QOZ80_5BG0447630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 19,124.67 Da | 25.35 | 77.75 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 34 | 157 | 1.9E-26 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 29 | 182 | 2.62E-38 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 29 | 182 | 8.7E-39 | IPR037176 |
| SMART | SM00205 | tha2 | 30 | 182 | 9.2E-16 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 164 | 1.2E-36 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 160 | 182 | 2.4 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 27 | 182 | 23.140144 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 29 | 41 | 5.1E-25 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 71 | 82 | 5.1E-25 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 122 | 138 | 5.1E-25 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 84 | 113 | 5.1E-25 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 172 | 181 | 5.1E-25 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_034588374.1 | thaumatin-like protein [Setaria viridis] | 0 |
| P25096 | Protein P21 OS=Glycine max OX=3847 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WLB8 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00165 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology