Basic Information
Locus ID:
gene-QOZ80_5BG0447120
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 72102949 | 72115471 | + | gene-QOZ80_5BG0447120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 91,207.01 Da | 51.02 | 71.61 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 266 | 804 | 2.2E-58 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 264 | 807 | 5.3E-84 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 756 | 818 | 1.7E-17 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 570 | 755 | 3.8E-8 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 249 | 481 | 1.3E-67 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 266 | 807 | 36.441086 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 267 | 282 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_025808312.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Panicum hallii] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9WLX9 | Ubiquitin carboxyl-terminal hydrolase OS=Eragrostis curvula OX=38414 GN=EJB05_00264 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology