Basic Information
Locus ID:
gene-QOZ80_5BG0446630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 71727304 | 71729874 | + | gene-QOZ80_5BG0446630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 83,958.10 Da | 32.85 | 88.82 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 304 | 342 | 7.74663E-5 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 32 | 96 | 6.4E-11 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 432 | 700 | 2.0E-47 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 300 | 353 | 4.95E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 704 | 2.83E-73 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 257 | 352 | 5.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 508 | 722 | 1.2E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 406 | 507 | 1.3E-30 | - |
| SMART | SM00181 | egf_5 | 254 | 303 | 51.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 307 | 353 | 0.94 | IPR000742 |
| SMART | SM00220 | serkin_6 | 432 | 705 | 7.9E-39 | IPR000719 |
| SMART | SM00179 | egfca_6 | 304 | 353 | 2.7E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 432 | 705 | 36.696823 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 438 | 461 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 553 | 565 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 304 | 337 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_025807083.1 | wall-associated receptor kinase 1-like [Panicum hallii] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6VLD8 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G409900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology