HalophFGD

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Basic Information
Locus ID: gene-QOZ80_5BG0446600
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Wall-associated receptor kinase 5
Maps and Mapping Data
Chromosome Start End Strand ID
chr5B 71691492 71692867 + gene-QOZ80_5BG0446600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.11 35,973.63 Da 35.66 73.97 0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 40 104 2.9E-11 IPR025287
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G21210.1 wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development 0
RefSeq XP_034584042.1 wall-associated receptor kinase 1-like [Setaria viridis] 0
Swiss-Prot Q9LMN6 Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 0
TrEMBL A0A2T7EJB9 Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G472400 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 6 AH05.4064, AH05.4065, BH05.4160, BH05.4161, CH05.4382 ...
CH05.4383
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_5AG0397990, gene-QOZ80_5AG0398020 ...
gene-QOZ80_5AG0398030, gene-QOZ80_5AG0398050, gene-QOZ80_5BG0446600, gene-QOZ80_5BG0446630
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.5HG0427440.1, HORVU.MOREX.r3.5HG0427450.1 ...
HORVU.MOREX.r3.5HG0531280.1, HORVU.MOREX.r3.5HG0531310.1, HORVU.MOREX.r3.5HG0531340.1
Poaceae Lolium multiflorum 7 gene-QYE76_000977, gene-QYE76_000979, gene-QYE76_028935 ...
gene-QYE76_060285, gene-QYE76_060287, gene-QYE76_060321, gene-QYE76_060322
Poaceae Oryza coarctata 1 Oco23G010440
Poaceae Oryza sativa 5 LOC_Os03g44050.1, LOC_Os03g44140.1, LOC_Os12g42040.1 ...
LOC_Os12g42060.1, LOC_Os12g42070.1
Poaceae Paspalum vaginatum 4 gene-BS78_08G148000, gene-BS78_08G148500 ...
gene-BS78_08G148600, gene-BS78_08G148900
Poaceae Puccinellia tenuiflora 4 Pt_Chr0106202, Pt_Chr0404489, Pt_Chr0704476, Pt_Chr0704499
Poaceae Sporobolus alterniflorus 6 Chr04G019120, Chr06G019960, Chr19G007610, Chr19G007630 ...
Chr27G009090, Chr27G009120
Poaceae Thinopyrum elongatum 6 Tel5E01G086400, Tel5E01G086500, Tel5E01G089600 ...
Tel5E01G807800, Tel5E01G807900, Tel5E01G808400
Poaceae Triticum dicoccoides 12 gene_TRIDC4AG052680, gene_TRIDC4AG052690 ...
gene_TRIDC4AG052700, gene_TRIDC4AG052710, gene_TRIDC4AG052730, gene_TRIDC5AG005490, gene_TRIDC5AG005500, gene_TRIDC5BG005800, gene_TRIDC5BG005810, gene_TRIDC5BG077760, gene_TRIDC5BG077770, gene_TRIDC5BG077780
Poaceae Triticum aestivum 12 TraesCS4A02G351600.1, TraesCS4A02G351700.1 ...
TraesCS5A02G035200.1, TraesCS5A02G035300.1, TraesCS5B02G034935.1, TraesCS5B02G035000.1, TraesCS5B02G521800.1, TraesCS5D02G043400.1, TraesCS5D02G043500.1, TraesCS5D02G520500.1, TraesCS5D02G520600.1, TraesCS5D02G520800.1
Poaceae Zea mays 1 Zm00001eb031770_P001
Poaceae Zoysia japonica 4 nbis-gene-44515, nbis-gene-44516, nbis-gene-47503 ...
nbis-gene-47506
Poaceae Zoysia macrostachya 2 Zma_g25339, Zma_g26132
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.