Basic Information
Locus ID:
gene-QOZ80_5BG0445800
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
HMT3
Description:
betaine-homocysteine S-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 70899282 | 70902309 | + | gene-QOZ80_5BG0445800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 36,409.56 Da | 36.59 | 89.50 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 23 | 323 | 2.2E-76 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 20 | 327 | 8.63E-82 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 17 | 323 | 6.7E-102 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 126 | 212 | 370.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 5 | 119 | 4.1E-4 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 276 | 332 | 0.52 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 11 | 325 | 46.764996 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_039802803.1 | homocysteine S-methyltransferase 3 [Panicum virgatum] | 0 |
| Q9FUM8 | Homocysteine S-methyltransferase 3 OS=Zea mays OX=4577 GN=HMT-3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7EJ33 | Hcy-binding domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G466200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology