Basic Information
Locus ID:
gene-QOZ80_5BG0445320
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 70369043 | 70369357 | + | gene-QOZ80_5BG0445320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 11,364.11 Da | 56.90 | 78.65 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 65 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039773090.1 | U-box domain-containing protein 21-like [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0XP92 | RING-type E3 ubiquitin transferase OS=Panicum virgatum OX=38727 GN=PVAP13_1KG033600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_5BG0445320 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG031950 |
| Poaceae | Triticum aestivum | 1 | TraesCS7A02G104500.1.cds1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-45470 |