Basic Information
Locus ID:
gene-QOZ80_5BG0442990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 66834555 | 66843571 | - | gene-QOZ80_5BG0442990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 82,131.68 Da | 38.38 | 86.20 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 629 | 666 | 1.8E-5 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 19 | 300 | 3.5E-43 | IPR000719 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 454 | 697 | 1.46E-31 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 302 | 3.24E-63 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 455 | 709 | 1.4E-39 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 315 | 3.7E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 92 | 5.1E-20 | - |
| SMART | SM00220 | serkin_6 | 18 | 305 | 9.1E-26 | IPR000719 |
| SMART | SM00320 | WD40_4 | 627 | 666 | 2.4E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 549 | 581 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 583 | 624 | 22.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 491 | 532 | 17.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 448 | 483 | 230.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 634 | 666 | 8.971213 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 510 | 535 | 8.837541 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 303 | 34.633259 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 45 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015616462.1 | uncharacterized protein LOC4350061 [Oryza sativa Japonica Group] | 0 |
| O65472 | Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=CRK12 PE=3 SV=3 | 0 | |
| TrEMBL | A0A0E0IZK3 | Protein kinase domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0394730, gene-QOZ80_5BG0442940 ... |