Basic Information
Locus ID:
gene-QOZ80_5BG0442980
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 66814391 | 66821929 | - | gene-QOZ80_5BG0442980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 89,301.35 Da | 35.66 | 86.11 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 701 | 728 | 2.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 547 | 585 | 3.5E-6 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 19 | 300 | 1.3E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 313 | 8.23E-64 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 457 | 759 | 1.18E-39 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 315 | 2.9E-47 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 460 | 771 | 2.7E-52 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 92 | 1.4E-20 | - |
| SMART | SM00320 | WD40_4 | 602 | 634 | 22.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 688 | 728 | 1.7E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 545 | 585 | 4.4E-8 | IPR001680 |
| SMART | SM00220 | serkin_6 | 18 | 305 | 4.1E-27 | IPR000719 |
| SMART | SM00320 | WD40_4 | 644 | 685 | 58.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 696 | 728 | 8.737287 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 303 | 35.806381 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 553 | 588 | 11.761044 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 553 | 594 | 14.451798 | IPR001680 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 572 | 586 | - | IPR019775 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23130.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_015616462.1 | uncharacterized protein LOC4350061 [Oryza sativa Japonica Group] | 0 |
| Q9C5S8 | Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1 | 0 | |
| TrEMBL | Q2R8X9 | Protein kinase domain containing protein, expressed OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g10640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0394730, gene-QOZ80_5BG0442940 ... |