Basic Information
Locus ID:
gene-QOZ80_5BG0442250
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 65884206 | 65886298 | + | gene-QOZ80_5BG0442250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 54,062.32 Da | 77.71 | 53.41 | -1.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 355 | 436 | 9.9E-20 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 453 | 484 | 1.4E-6 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 355 | 437 | 1.3E-28 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 298 | - | - |
| Coils | Coil | Coil | 389 | 415 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_022681230.1 | eukaryotic translation initiation factor 5B isoform X1 [Setaria italica] | 0 |
| TrEMBL | A0A5J9WM34 | PAPA-1 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_01086 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology