Basic Information
Locus ID:
gene-QOZ80_5BG0442190
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 65839373 | 65846784 | - | gene-QOZ80_5BG0442190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 83,796.57 Da | 55.40 | 70.61 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 488 | 734 | 2.6233E-132 | - |
| CDD | cd00130 | PAS | 119 | 220 | 1.36345E-15 | IPR000014 |
| Pfam | PF00989 | PAS fold | 111 | 217 | 1.2E-17 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 483 | 734 | 1.4E-69 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 109 | 220 | 3.14E-20 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 452 | 734 | 1.35E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 475 | 559 | 1.6E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 121 | 226 | 4.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 754 | 1.6E-63 | - |
| SMART | SM00091 | pas_2 | 110 | 176 | 3.8E-11 | IPR000014 |
| SMART | SM00220 | serkin_6 | 482 | 742 | 3.6E-61 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 109 | 220 | 6.1E-16 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 482 | 743 | 45.375099 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 108 | 179 | 19.18119 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 601 | 613 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 705 | 727 | 1.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 642 | 652 | 1.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 595 | 613 | 1.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 556 | 569 | 1.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 661 | 683 | 1.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 304 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
| Coils | Coil | Coil | 727 | 747 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67890.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_039839800.1 | dual specificity protein kinase shkD-like [Panicum virgatum] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WPC2 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_01091 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology