Basic Information
Locus ID:
gene-QOZ80_5BG0442100
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 65632651 | 65634403 | - | gene-QOZ80_5BG0442100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 25,144.37 Da | 37.25 | 70.50 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 3 | 94 | 4.65765E-10 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 112 | 216 | 8.6E-14 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 116 | 215 | 3.65E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 1 | 98 | 4.41E-13 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1 | 93 | 2.4E-11 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 94 | 218 | 5.5E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 91 | 220 | 1.2E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 91 | 182 | 11.336782 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1 | 93 | 11.083644 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G43700.3 | - | 0 |
| RefSeq | XP_002443354.2 | BTB/POZ and MATH domain-containing protein 3 [Sorghum bicolor] | 0 |
| Q6IQ16 | Speckle-type POZ protein-like OS=Homo sapiens OX=9606 GN=SPOPL PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WPB9 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01133 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5BG0442100, gene-QOZ80_5BG0442120 |