Basic Information
Locus ID:
gene-QOZ80_5BG0440720
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
MSP (Major sperm protein) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 63145864 | 63157893 | - | gene-QOZ80_5BG0440720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 77,509.64 Da | 40.56 | 90.24 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 23 | 132 | 5.1E-7 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 321 | 589 | 1.2E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 272 | 8.84E-36 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 301 | 595 | 5.47E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 9 | 138 | 1.9E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 614 | 3.1E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 267 | 7.1E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 294 | 386 | 1.2E-20 | - |
| SMART | SM00220 | serkin_6 | 316 | 598 | 5.7E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 255 | 11.877521 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 618 | 673 | 9.707193 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 595 | 33.389469 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 456 | 468 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 46 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11410.2 | - | 0 |
| RefSeq | XP_039801974.1 | uncharacterized protein LOC120666246 isoform X2 [Panicum virgatum] | 0 |
| Q9LPZ3 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana OX=3702 GN=At1g11410 PE=3 SV=3 | 0 | |
| TrEMBL | A0A8T0UK86 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG233400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_5AG0390880, gene-QOZ80_5AG0390900 ... |