HalophFGD

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Basic Information
Locus ID: gene-QOZ80_5BG0439510
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Dienelactone hydrolase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr5B 59441182 59442487 - gene-QOZ80_5BG0439510
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.10 44,867.06 Da 37.60 95.01 -0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 36 90 2.35E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K14515 (EIN3-binding F-box protein)
Pathway:
ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant) ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034572468.1 uncharacterized protein LOC117837023 [Setaria viridis] 0
TrEMBL A0A2T7EHC1 DUF295 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G417700 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 BH05.3564, CH05.3727, CH05.3746
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_5AG0391720, gene-QOZ80_5AG0391740 ...
gene-QOZ80_5AG0391760, gene-QOZ80_5BG0439440, gene-QOZ80_5BG0439450, gene-QOZ80_5BG0439470, gene-QOZ80_5BG0439510
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0101690.1, HORVU.MOREX.r3.2HG0101700.1
Poaceae Lolium multiflorum 3 gene-QYE76_002505, gene-QYE76_033379, gene-QYE76_035213
Poaceae Paspalum vaginatum 2 gene-BS78_08G079100, gene-BS78_08G079200
Poaceae Sporobolus alterniflorus 4 Chr06G015570, Chr06G016380, Chr06G016400, Chr06G016420
Poaceae Thinopyrum elongatum 1 Tel2E01G112000
Poaceae Triticum aestivum 7 TraesCS2A02G047700.1, TraesCS2B02G059300.1 ...
TraesCS2D02G045800.1, TraesCS2D02G046100.1, TraesCS2D02G046300.1, TraesCS2D02G046400.1, TraesCS3D02G504100.1
Poaceae Zoysia japonica 1 nbis-gene-30169
Poaceae Zoysia macrostachya 1 Zma_g25875
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.