Basic Information
Locus ID:
gene-QOZ80_5BG0439080
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 58185924 | 58193670 | + | gene-QOZ80_5BG0439080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 90,286.38 Da | 39.54 | 90.23 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 40 | 310 | 1.2E-37 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 679 | 764 | 1.0E-13 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 386 | 648 | 5.5E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 651 | 1.15E-64 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 315 | 1.75E-50 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 669 | 792 | 3.92E-18 | IPR008962 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 475 | 668 | 6.6E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 337 | 1.5E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 454 | 6.5E-20 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 669 | 796 | 4.6E-22 | IPR013783 |
| SMART | SM00220 | serkin_6 | 384 | 657 | 8.4E-33 | IPR000719 |
| SMART | SM00220 | serkin_6 | 38 | 311 | 2.0E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 384 | 654 | 34.110302 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 674 | 794 | 15.32434 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 320 | 26.986765 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 166 | 178 | - | IPR008266 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 516 | 528 | - | IPR008271 |
| Coils | Coil | Coil | 348 | 368 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_039801974.1 | uncharacterized protein LOC120666246 isoform X2 [Panicum virgatum] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0UK86 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG233400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH05.3525, CH04.920, CH05.3680, Contig522.28 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0380720, gene-QOZ80_5BG0439080 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0225170.1, HORVU.MOREX.r3.7HG0748020.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_036867, gene-QYE76_036876, gene-QYE76_036884 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G051900, gene-BS78_08G093000 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401585 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G157900, Tel7E01G940400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG004390, gene_TRIDC7AG075260 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS3A02G073900.1, TraesCS3D02G522300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb164620_P001 |