Basic Information
Locus ID:
gene-QOZ80_5BG0437920
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 53475233 | 53491821 | + | gene-QOZ80_5BG0437920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 90,608.22 Da | 41.47 | 90.86 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 661 | 758 | 3.7E-16 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 362 | 631 | 1.4E-42 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 23 | 288 | 2.2E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 304 | 4.29E-56 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 660 | 779 | 1.02E-19 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 637 | 8.23E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 302 | 1.3E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 429 | 9.3E-20 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 658 | 783 | 3.1E-23 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 88 | 2.5E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 657 | 7.4E-48 | - |
| SMART | SM00220 | serkin_6 | 357 | 640 | 3.8E-29 | IPR000719 |
| SMART | SM00220 | serkin_6 | 18 | 296 | 2.0E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 637 | 32.244614 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 305 | 29.248205 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 660 | 780 | 17.859705 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 46 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 498 | 510 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11410.2 | - | 0 |
| RefSeq | XP_039801974.1 | uncharacterized protein LOC120666246 isoform X2 [Panicum virgatum] | 0 |
| Q9LPZ3 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana OX=3702 GN=At1g11410 PE=3 SV=3 | 0 | |
| TrEMBL | A0A8T0UK86 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG233400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_5AG0390880, gene-QOZ80_5AG0390900 ... |