Basic Information
Locus ID:
gene-QOZ80_5BG0437890
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 53395895 | 53396530 | - | gene-QOZ80_5BG0437890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 23,318.09 Da | 53.38 | 71.56 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 4 | 73 | 2.85161E-7 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 145 | 210 | 4.08E-6 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 3 | 78 | 2.94E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 135 | 211 | 2.4E-5 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 2 | 109 | 2.6E-8 | IPR008974 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 134 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_048574310.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum urartu] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WQZ1 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01736 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0389700, gene-QOZ80_5BG0437890 |