HalophFGD

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Basic Information
Locus ID: gene-QOZ80_5BG0432430
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5B 23012648 23013823 - gene-QOZ80_5BG0432430
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.96 43,322.44 Da 46.29 97.29 0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 16 69 7.52E-10 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_004960769.1 uncharacterized protein LOC101769844 [Setaria italica] 0
TrEMBL K3Z6M6 F-box domain-containing protein OS=Setaria italica OX=4555 GN=101769844 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 BH05.512, BH05.518, CH05.584
Poaceae Eleusine coracana subsp. coracana 10 gene-QOZ80_2BG0164990, gene-QOZ80_5AG0380930 ...
gene-QOZ80_5AG0385220, gene-QOZ80_5AG0385230, gene-QOZ80_5AG0385330, gene-QOZ80_5AG0385340, gene-QOZ80_5AG0385350, gene-QOZ80_5BG0428070, gene-QOZ80_5BG0432410, gene-QOZ80_5BG0432430
Poaceae Sporobolus alterniflorus 1 Chr06G025820
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.