Basic Information
Locus ID:
gene-QOZ80_5BG0431370
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 20533812 | 20544548 | + | gene-QOZ80_5BG0431370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 69,203.90 Da | 46.05 | 93.14 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18052 | Rx N-terminal domain | 327 | 414 | 8.0E-9 | IPR041118 |
| Pfam | PF00069 | Protein kinase domain | 26 | 257 | 4.9E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 271 | 2.97E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 85 | 278 | 2.8E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 83 | 6.2E-12 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 326 | 449 | 6.9E-7 | - |
| SMART | SM00220 | serkin_6 | 23 | 260 | 1.6E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 260 | 31.198698 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 29 | 52 | - | IPR017441 |
| Coils | Coil | Coil | 348 | 368 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_012703842.1 | eIF-2-alpha kinase GCN2 isoform X3 [Setaria italica] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0P739 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG151500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0384610, gene-QOZ80_5BG0431370 |