Basic Information
Locus ID:
gene-QOZ80_5BG0428880
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 15957701 | 15960923 | - | gene-QOZ80_5BG0428880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.62 | 73,214.88 Da | 68.03 | 85.69 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 304 | 560 | 2.94E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 191 | 233 | 9.48E-5 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 97 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002442825.1 | putative F-box/FBD/LRR-repeat protein At4g00315 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9WSR7 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_02313 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_06G006580 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103696290, gene-LOC103709871 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3114.V1.1 |
| Poaceae | Echinochloa crus-galli | 12 | AH02.2967, AH02.2968, AH05.224, AH05.225, AH05.226, BH05.254 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5BG0428880, gene-QOZ80_6AG0538570 |
| Poaceae | Oryza coarctata | 2 | Oco02G019100, Oco02G019110 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g51720.1, LOC_Os01g51740.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G172600 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G022330, Chr06G024100 |
| Poaceae | Zea mays | 1 | Zm00001eb406850_P001 |
| Posidoniaceae | Posidonia oceanica | 4 | gene.Posoc04g03080, gene.Posoc04g03090, gene.Posoc04g03100 ... |