Basic Information
Locus ID:
gene-QOZ80_5BG0422350
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 9091194 | 9092628 | + | gene-QOZ80_5BG0422350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.10 | 39,627.14 Da | 43.59 | 58.76 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 92 | 130 | 2.01116E-15 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 37 | 76 | 8.68624E-15 | - |
| CDD | cd00325 | chitinase_GH19 | 142 | 365 | 1.47083E-83 | - |
| Pfam | PF00187 | Chitin recognition protein | 92 | 129 | 1.9E-14 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 141 | 365 | 4.5E-87 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 38 | 75 | 1.2E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 38 | 80 | 7.72E-13 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 139 | 372 | 2.39E-73 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 92 | 131 | 7.86E-13 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 146 | 371 | 3.5E-87 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 90 | 131 | 2.9E-17 | IPR036861 |
| Gene3D | G3DSA:3.30.60.10 | - | 36 | 77 | 7.5E-16 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 219 | 276 | 3.5E-87 | - |
| SMART | SM00270 | ChitinBD_3 | 38 | 75 | 2.6E-17 | IPR001002 |
| SMART | SM00270 | ChitinBD_3 | 92 | 129 | 2.4E-18 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 81 | 372 | 1.7E-101 | IPR016283 |
| PIRSF | PIRSF001060 | Endochitinase | 9 | 89 | 7.6E-8 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 90 | 131 | 10.905722 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 36 | 77 | 10.831136 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 156 | 178 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 102 | 121 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 108 | 115 | 2.2E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 100 | 108 | 2.2E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 115 | 122 | 2.2E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | NP_001389452.1 | chitinase 7 precursor [Oryza sativa Japonica Group] | 0 |
| Q7Y1Z1 | Chitinase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U6P4 | chitinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_35444 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology