Basic Information
Locus ID:
gene-QOZ80_5BG0422300
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Chitinase class I
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 9049415 | 9050556 | + | gene-QOZ80_5BG0422300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.55 | 37,187.18 Da | 44.18 | 65.09 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 102 | 333 | 8.31809E-109 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 31 | 70 | 4.62679E-16 | - |
| Pfam | PF00182 | Chitinase class I | 101 | 333 | 1.8E-121 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 32 | 69 | 5.2E-12 | IPR001002 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 98 | 340 | 1.43E-101 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 32 | 74 | 4.71E-11 | IPR036861 |
| Gene3D | G3DSA:3.30.60.10 | - | 30 | 71 | 1.4E-14 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 185 | 242 | 2.7E-114 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 106 | 339 | 2.7E-114 | - |
| SMART | SM00270 | ChitinBD_3 | 32 | 69 | 2.2E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 8 | 340 | 1.0E-121 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 30 | 71 | 10.676991 | IPR001002 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 42 | 61 | - | IPR018371 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 119 | 141 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 246 | 256 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 48 | 55 | 4.0E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 55 | 62 | 4.0E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 40 | 48 | 4.0E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_037415762.1 | chitinase 2-like [Triticum dicoccoides] | 0 |
| Q688M5 | Chitinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7K4R8 | chitinase OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology