Basic Information
Locus ID:
gene-QOZ80_5BG0422250
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Chitinase class I
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 8994233 | 8995340 | - | gene-QOZ80_5BG0422250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 35,712.65 Da | 37.80 | 60.74 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 30 | 68 | 6.3382E-17 | - |
| CDD | cd00325 | chitinase_GH19 | 90 | 321 | 1.7292E-113 | - |
| Pfam | PF00187 | Chitin recognition protein | 31 | 68 | 3.0E-12 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 89 | 321 | 2.8E-127 | IPR000726 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 31 | 78 | 7.07E-12 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 86 | 328 | 2.05E-104 | IPR023346 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 173 | 230 | 4.5E-116 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 29 | 71 | 1.3E-14 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 93 | 327 | 4.5E-116 | - |
| SMART | SM00270 | ChitinBD_3 | 31 | 68 | 7.6E-16 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 5 | 328 | 2.1E-121 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 29 | 70 | 10.751577 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 234 | 244 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 107 | 129 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 39 | 47 | 3.9E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 47 | 54 | 3.9E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 54 | 61 | 3.9E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | NP_001150560.1 | Chitinase 2 precursor [Zea mays] | 0 |
| Q7DNA1 | Chitinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9RZ79 | chitinase OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology