Basic Information
Locus ID:
gene-QOZ80_5BG0419000
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 6376014 | 6377234 | - | gene-QOZ80_5BG0419000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.92 | 45,266.16 Da | 48.36 | 84.36 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 78 | 386 | 1.2E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 393 | 4.43E-51 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 46 | 161 | 2.2E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 402 | 6.9E-35 | - |
| SMART | SM00220 | serkin_6 | 74 | 386 | 3.7E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 386 | 26.704086 | IPR000719 |
| Coils | Coil | Coil | 314 | 334 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01560.2 | MAP kinase 11. member of MAP Kinase | 0 |
| RefSeq | XP_039803791.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 0 |
| A2X6X1 | Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9TCD8 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42059 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH06.371 |
| Poaceae | Eleusine coracana subsp. coracana | 10 | gene-QOZ80_1BG0063630, gene-QOZ80_5AG0371540 ... |
| Poaceae | Sporobolus alterniflorus | 4 | Chr04G013650, Chr12G018460, Chr18G010490, Chr22G007160 |