Basic Information
Locus ID:
gene-QOZ80_5BG0417840
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 5590044 | 5594524 | - | gene-QOZ80_5BG0417840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 140,503.44 Da | 42.32 | 67.77 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 252 | 338 | 3.74333E-29 | - |
| Pfam | PF00855 | PWWP domain | 252 | 339 | 1.3E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 248 | 347 | 1.32E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 247 | 349 | 2.0E-24 | - |
| SMART | SM00293 | PWWP_4 | 252 | 313 | 8.8E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 254 | 315 | 15.380357 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1120 | 1140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 652 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1148 | 1202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 789 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 823 | 864 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1250 | 1295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1210 | 1235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 864 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1106 | 1310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 820 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_025806246.1 | uncharacterized protein LOC112884854 [Panicum hallii] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5VVT7 | PWWP domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0009754 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology